In my previous post we discussed about importance of BigData and which forms of display work for various types of data. We also learned basics of sigma.js, how to get started with sigma.js and use JSON parser to render Json Data of friends.json
When we talk about Bigdata visualization, length of data should be very large. So to render such big data which have thousands of nodes and edges we must have to use Layout algorithm to position the nodes of graph in to two-dimensional or three-dimensional space.
While we know that ForceAtlas2 is outdated and many more incredible and better tools are available in the market, you might want to check out how Cytoscape.js works for your graphical data representation needs!
Let’s talk about big data visualization and using ForceAtlas2 algorithm in this post.
ForceAtlas2 is a force directed layout. Force-directed graph drawing algorithm is a class of algorithm for drawing graph. Main purpose of it is to position the nodes of a graph in to two-dimensional or three-dimensional space.
The most straightforward Force-directed algorithm uses repulsive forces between nodes and attractive forces between adjacent nodes.
The main algorithm consists on a main loop that simulates the system for some iteration and then plots the graph. The system will consist on repulsive forces between all graph nodes and attractive forces between adjacent nodes.
ForceAtlas2 is a force-directed layout close to other algorithms used for network specialization. Nodes repulse each other like charged particles, while edges attract their nodes, like springs. These forces create a movement that converges to a balanced state. This final configuration is expected to help the interpretation of the data.
Let’s get started with very simple code snippet which shows you how to use ForceAtlas2 layout.
Download forceAtlas2 plug-in from https://github.com/jacomyal/sigma.js/tree/master/plugins/sigma.layout.forceAtlas2
for this example, i’m using bellow json file
[sourcecode language=”plain”]
test.json
{
“nodes”: [
{
“id”: “n0”,
“label”: “jay”,
“dept” : “it”
},
{
“id”: “n1”,
“label”: “yogi!”,
“dept”: “hr”
},
{
“id”: “n2”,
“label”: “priya”,
“dept”: “it”
},
{
“id”: “n3”,
“label”: “dumpy”,
“dept”: “hr”
}
],
“edges”: [
{
“id”: “e0”,
“source”: “n0”,
“target”: “n1”
},
{
“id”: “e1”,
“source”: “n2”,
“target”: “n3”
},
{
“id”: “e3”,
“source”: “n2”,
“target”: “n1″
}
]
}
index.html
<html>
<head>
<title>Basic sigma.js example</title>
<style type=”text/css”>
body {
margin: 0;
}
#container {
position: absolute;
width: 50%;
height: 50%;
}
</style>
</head>
<body>
<div id=”container”></div>
<script type=”text/javascript” src=”js/sigma.min.js”></script>
<script type=”text/javascript” src=”js/sigma.parsers.json.js”></script>
<script src=”js/sigma.layout.forceAtlas2/worker.js”></script>
<script src=”js/sigma.layout.forceAtlas2/supervisor.js”></script>
<script type=”text/javascript”>
var s = new sigma({
container : ‘container’,
});
sigma.parsers.json(
‘data/test.json’,
s,
function () {
var i,
nodes = s.graph.nodes();
len = nodes.length;
// providing x,y,size and color properties to node
for(i=0;i<len;i++){
nodes[i].x = Math.random();
nodes[i].y = Math.random();
nodes[i].size = s.graph.degree(nodes[i].id);
nodes[i].color = (nodes[i].dept == ‘it’)?”rgb(255,104,102)”:”rgb(145,204,102)”;
}
s.refresh();
var fa = sigma.layouts.configForceAtlas2(s, {
worker: true,
autoStop: true,
background: true,
scaleRatio: 30,
gravity: 3
});
// Bind the events:
fa.bind(‘start stop’, function(e) {
console.log(e.type);
});
sigma.layouts.startForceAtlas2();
}
);
</script>
</body>
</html>
[/sourcecode]
To start a layout i used sigma.startForceAtlas2 method. You will find more information regarding methods on plug-in wiki page itself.
I’ll demonstrate how to build Simple Sigma.js AngularJs Directive for big data visualization in my next post. Stay tuned folks.. !!
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Jaydipsinh Raol
Technology seeker, dreamer and a skilled software engineer working on progressive technologies. You may call me a little workaholic. Always try to achieve goals with best efforts. Ready to learn from my past mistakes and regulate life for great future achievements.